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Development of Hexaploid Wheat Germplasm with Resistance to Both Powdery Mildew and Stripe Rust by Introgression of Pm60 and YrU1 from Triticum urartu, Pan, W., Yang, J., Zhang, B., Zhang, J., Sun, J., Yang, Z., Liu, N., Wei, W., Zhang, Q., Fahima, T., Guo, W., Ma, J., Li, Y. & Xie, C., Jun 2026, In: Plants. 15, 12, 1802.
Characterization of Durum–Einkorn Amphiploids for Introgression of Powdery Mildew Resistance from Einkorn into Common Wheat, Sheng, W., Chen, L., Ma, J., Saqlain, M., Latif, M. H., Zhang, K., Yang, J., Nosherwan, M., Zhu, W., Xu, L., Wu, D., Zhou, Y., Xie, C., Kang, H., Fahima, T. & Li, Y., Jun 2026, In: Pathogens. 15, 6, 653.
Effects of Pathogen Load and Host Genetic Background on Tandem Kinase-Mediated Resistance in Wheat, Govta, L., Govta, N., Shams, I., Coaker, G. & Fahima, T., 1 May 2026, In: Phytopathology. 116, 5, p. 697-706 10 p.
Ancient grains illuminate the mosaic origin of domesticated wheat, Lev-Mirom, Y., Ashkenazy, N., Klymiuk, V., Ens, J., Wiebe, K., Schuenemann, V. J., Eilam, T., Kulikovsky, S., Lavi, B. A., Günther, T., Krugman, T., Sela, H., Klein, E., Ganor, A., Davidovich, U., Porat, R., Ben-Yosef, E., David, M., Frankin, S. & Ben-David, R. & 12 others, Cavalet-Giorsa, E., Krattinger, S. G., Korol, A., Mascher, M., Himmelbach, A., Stein, N., Krause, J., Distelfeld, A., Weiss, E., Fahima, T., Pozniak, C. J. & Hübner, S., May 2026, In: Nature Plants. 12, 5, p. 954-963 10 p.
Identification of a novel Fusarium head blight resistance locus Fhb.Er-1StL from Elymus repens introgressed into wheat, Wang, F., Wei, H., Wang, Q., Yang, Y., Zhu, W., Xu, L., Wu, D., Cheng, Y., Zhang, Y., Wang, Y., Zeng, J., Fan, X., Fahima, T., Zhou, Y., Kang, H. & Li, Y., May 2026, (E-pub ahead of print) In: Journal of Experimental Botany. 11 p.
Two complementary NLRs from wild emmer wheat confer powdery mildew resistance, Yang, Z., Liu, N., Xie, X., Wei, W., Bai, Y., Sun, J., Pan, W., Yang, J., Wang, W., Xie, X., Saqlain, M., Kang, H., Li, B., Hu, Z., Gou, J., Guo, W., Song, S., Ma, J., Fahima, T. & Sun, Q. & 3 others, Qiu, L., Li, Y. & Xie, C., Dec 2025, In: Nature Communications. 16, 1, 9041.
A haplotype-based evolutionary history of barley domestication, Guo, Y., Jayakodi, M., Himmelbach, A., Ben-Yosef, E., Davidovich, U., David, M., Hartmann-Shenkman, A., Kislev, M., Fahima, T., Schuenemann, V. J., Reiter, E., Krause, J., Steffenson, B. J., Stein, N., Weiss, E. & Mascher, M., 20 Nov 2025, In: Nature. 647, 8090, p. 680-688 9 p.
The Spectrum of Diverse Disease-Resistance Genes Cloned and Characterized in the Triticeae Tribe, Li, Y., Govta, L., Sung, Y. C., Coaker, G. & Fahima, T., 3 Sep 2025, In: Annual Review of Phytopathology. 63, 1, p. 175-200 26 p.
A head-to-head NLR gene pair from wild emmer confers stripe rust resistance in wheat, Hu, Y., Li, M., Li, Y., Du, L., Xie, R., Ni, F., Xia, C., Wang, K., Huang, Y., Xu, B., Li, Y., Jiang, Y., Hao, M., Jiang, B., Ning, S., Yuan, Z., Feng, L., Zhang, L., Chen, S. & Wu, B. & 4 others, Liu, Z., Fahima, T., Liu, D. & Huang, L., Jun 2025, In: Nature Genetics. 57, 6, p. 1543-1552 10 p.
An atypical NLR pair TdCNL1/TdCNL5 from wild emmer confers powdery mildew resistance in wheat, Zhu, K., Li, M., Dong, L., Zhang, H., Zhang, D., Lu, P., Wu, Q., Xie, J., Chen, Y., Guo, G., Zhang, P., Li, B., Li, W., Dong, L., Hou, Y., Yang, Y., Qiu, D., Wang, G., Huang, B. & Cui, X. & 8 others, Fu, H., Yuan, C., Fahima, T., Nevo, E., Li, H., Rong, J., Hua, W. & Liu, Z., Jun 2025, In: Nature Genetics. 57, 6, p. 1553-1562 10 p.
Wheat tandem kinase RWT4 directly binds a fungal effector to activate defense, Sung, Y. C., Li, Y., Bernasconi, Z., Baik, S., Asuke, S., Keller, B., Fahima, T. & Coaker, G., May 2025, In: Nature Genetics. 57, 5, p. 1238-1249 12 p., 1607.
Plasticity of Root System Architecture and Whole Transcriptome Responses Underlying Nitrogen Deficiency Tolerance Conferred by a Wild Emmer Wheat QTL, Govta, N., Govta, L., Sela, H., Peleg, G., Distelfeld, A., Fahima, T., Beckles, D. M. & Krugman, T., Apr 2025, In: Plant, Cell and Environment. 48, 4, p. 2835-2855 21 p.
Tandem kinase proteins across the plant kingdom, Reveguk, T., Fatiukha, A., Potapenko, E., Reveguk, I., Sela, H., Klymiuk, V., Li, Y., Pozniak, C., Wicker, T., Coaker, G. & Fahima, T., Jan 2025, In: Nature Genetics. 57, 1, p. 254-262 9 p., 3735.
A membrane associated tandem kinase from wild emmer wheat confers broad-spectrum resistance to powdery mildew, Li, M., Zhang, H., Xiao, H., Zhu, K., Shi, W., Zhang, D., Wang, Y., Yang, L., Wu, Q., Xie, J., Chen, Y., Qiu, D., Guo, G., Lu, P., Li, B., Dong, L., Li, W., Cui, X., Li, L. & Tian, X. & 9 others, Yuan, C., Li, Y., Yu, D., Nevo, E., Fahima, T., Li, H., Dong, L., Zhao, Y. & Liu, Z., Dec 2024, In: Nature Communications. 15, 1, 3124.
Nitrogen deficiency tolerance conferred by introgression of a QTL derived from wild emmer into bread wheat, Govta, N., Fatiukha, A., Govta, L., Pozniak, C., Distelfeld, A., Fahima, T., Beckles, D. M. & Krugman, T., Aug 2024, In: Theoretical and Applied Genetics. 137, 8, 187.
Dissection of a rapidly evolving wheat resistance gene cluster by long-read genome sequencing accelerated the cloning of Pm69, Li, Y., Wei, Z. Z., Sela, H., Govta, L., Klymiuk, V., Roychowdhury, R., Chawla, H. S., Ens, J., Wiebe, K., Bocharova, V., Ben-David, R., Pawar, P. B., Zhang, Y., Jaiwar, S., Molnár, I., Doležel, J., Coaker, G., Pozniak, C. J. & Fahima, T., 8 Jan 2024, In: Plant Communications. 5, 1, 100646.
Dosage differences in 12-OXOPHYTODIENOATE REDUCTASE genes modulate wheat root growth, Gabay, G., Wang, H., Zhang, J., Moriconi, J. I., Burguener, G. F., Gualano, L. D., Howell, T., Lukaszewski, A., Staskawicz, B., Cho, M. J., Tanaka, J., Fahima, T., Ke, H., Dehesh, K., Zhang, G. L., Gou, J. Y., Hamberg, M., Santa-María, G. E. & Dubcovsky, J., Dec 2023, In: Nature Communications. 14, 1, 539.
Pathogen perception and deception in plant immunity by kinase fusion proteins, Fahima, T. & Coaker, G., Jun 2023, In: Nature Genetics. 55, 6, p. 908-909 2 p.
Intracellular Reactive Oxygen Species-Aided Localized Cell Death Contributing to Immune Responses Against Wheat Powdery Mildew Pathogen, Li, Y., Roychowdhury, R., Govta, L., Jaiwar, S., Wei, Z. Z., Shams, I. & Fahima, T., May 2023, In: Phytopathology. 113, 5, p. 884-892 9 p.
Editorial: Advances in crop resistance breeding using modern genomic tools, Huang, L., Li, Y., Chen, S., Periyannan, S. & Fahima, T., 2023, In: Frontiers in Plant Science. 14, 1143689.
Discovery of stripe rust resistance with incomplete dominance in wild emmer wheat using bulked segregant analysis sequencing, Klymiuk, V., Chawla, H. S., Wiebe, K., Ens, J., Fatiukha, A., Govta, L., Fahima, T. & Pozniak, C. J., Dec 2022, In: Communications Biology. 5, 1, 826.
Genome-Wide Association Study in Bread Wheat Identifies Genomic Regions Associated with Grain Yield and Quality under Contrasting Water Availability, Govta, N., Polda, I., Sela, H., Cohen, Y., Beckles, D. M., Korol, A. B., Fahima, T., Saranga, Y. & Krugman, T., Sep 2022, In: International Journal of Molecular Sciences. 23, 18, 10575.
Functional characterization of powdery mildew resistance gene MlIW172, a new Pm60 allele and its allelic variation in wild emmer wheat, Wu, Q., Chen, Y., Li, B., Li, J., Zhang, P., Xie, J., Zhang, H., Guo, G., Lu, P., Li, M., Zhu, K., Li, W., Fahima, T., Nevo, E., Li, H., Dong, L. & Liu, Z., Aug 2022, In: Journal of Genetics and Genomics. 49, 8, p. 787-795 9 p.
Capturing Wheat Phenotypes at the Genome Level, Hussain, B., Akpınar, B. A., Alaux, M., Algharib, A. M., Sehgal, D., Ali, Z., Aradottir, G. I., Batley, J., Bellec, A., Bentley, A. R., Cagirici, H. B., Cattivelli, L., Choulet, F., Cockram, J., Desiderio, F., Devaux, P., Dogramaci, M., Dorado, G., Dreisigacker, S. & Edwards, D. & 38 others, El-Hassouni, K., Eversole, K., Fahima, T., Figueroa, M., Gálvez, S., Gill, K. S., Govta, L., Gul, A., Hensel, G., Hernandez, P., Crespo-Herrera, L. A., Ibrahim, A., Kilian, B., Korzun, V., Krugman, T., Li, Y., Liu, S., Mahmoud, A. F., Morgounov, A., Muslu, T., Naseer, F., Ordon, F., Paux, E., Perovic, D., Reddy, G. V. P., Reif, J. C., Reynolds, M., Roychowdhury, R., Rudd, J., Sen, T. Z., Sukumaran, S., Ozdemir, B. S., Tiwari, V. K., Ullah, N., Unver, T., Yazar, S., Appels, R. & Budak, H., 4 Jul 2022, In: Frontiers in Plant Science. 13, 851079.
Detection of crop diseases using enhanced variability imagery data and convolutional neural networks, Kendler, S., Aharoni, R., Young, S., Sela, H., Kis-Papo, T., Fahima, T. & Fishbain, B., Feb 2022, In: Computers and Electronics in Agriculture. 193, 106732.
Introgression of the powdery mildew resistance genes pm60 and pm60b from triticum urartu to common wheat using durum as a ‘bridge’, Zhang, Q., Li, Y., Li, Y., Fahima, T., Shen, Q. H. & Xie, C., Jan 2022, In: Pathogens. 11, 1, 25.
Tandem protein kinases emerge as new regulators of plant immunity, Klymiuk, V., Coaker, G., Fahima, T. & Pozniak, C. J., Oct 2021, In: Molecular Plant-Microbe Interactions. 34, 10
TdPm60 identified in wild emmer wheat is an ortholog of Pm60 and constitutes a strong candidate for PmG16 powdery mildew resistance, Li, Y., Wei, Z. Z., Fatiukha, A., Jaiwar, S., Wang, H., Hasan, S., Liu, Z., Sela, H., Krugman, T. & Fahima, T., Sep 2021, In: Theoretical and Applied Genetics. 134, 9, p. 2777-2793 17 p.
Bulked segregant CGT-Seq-facilitated map-based cloning of a powdery mildew resistance gene originating from wild emmer wheat (Triticum dicoccoides), Wu, Q., Zhao, F., Chen, Y., Zhang, P., Zhang, H., Guo, G., Xie, J., Dong, L., Lu, P., Li, M., Ma, S., Fahima, T., Nevo, E., Li, H., Zhang, Y. & Liu, Z., Jul 2021, In: Plant Biotechnology Journal. 19, 7, p. 1288-1290 3 p.
Selection for plastic, pathogen-inducible recombination in a red queen model with diploid antagonists, Rybnikov, S., Frenkel, Z., Korol, A. B. & Fahima, T., Jul 2021, In: Pathogens. 10, 7, 898.
Wild Emmer Wheat (Triticum dicoccoides) from Israel: An Important Source for Improving the Nutritional Value of Wheat Grains, Krugman, T., Fatiukha, A., Beckles, D. & Fahima, T., 2021, Ancient Grains in Modern Soils. Cooper, R. (ed.). Lancaster, Pennsylvania: DEStech Publications, p. 109-128
List of DNA Sequences deposited in NCBI GeneBank, Fahima, T., 2021
A CNL protein in wild emmer wheat confers powdery mildew resistance, Li, M., Dong, L., Li, B., Wang, Z., Xie, J., Qiu, D., Li, Y., Shi, W., Yang, L., Wu, Q., Chen, Y., Lu, P., Guo, G., Zhang, H., Zhang, P., Zhu, K., Li, Y., Zhang, Y., Wang, R. & Yuan, C. & 7 others, Liu, W., Yu, D., Luo, M. C., Fahima, T., Nevo, E., Li, H. & Liu, Z., 1 Nov 2020, In: New Phytologist. 228, 3, p. 1027-1037 11 p.
Selenium mitigates salt-induced oxidative stress in durum wheat (Triticum durum Desf.) seedlings by modulating chlorophyll fluorescence, osmolyte accumulation, and antioxidant system, Liang, Y., Li, D., Chen, Y., Cheng, J., Zhao, G., Fahima, T. & Yan, J., 1 Aug 2020, In: 3 Biotech. 10, 8, 368.
Durum Wheat as a Bridge Between Wild Emmer Wheat Genetic Resources and Bread Wheat, Klymiuk, V., Fatiukha, A., Huang, L., Wei, Z. Z., Kis-Papo, T., Saranga, Y., Krugman, T. & Fahima, T., 1 Jan 2019, Applications of Genetic and Genomic Research in Cereals. Elsevier, p. 201-230 30 p.
Shifting the limits in wheat research and breeding using a fully annotated reference genome, International Wheat Genome Sequencing Consortium (IWGSC), 17 Aug 2018, In: Science. 361, 6403, eaar7191.
Reciprocal hosts’ responses to powdery mildew isolates originating from domesticated wheats and their wild progenitor, Ben-David, R., Dinoor, A., Peleg, Z. & Fahima, T., 23 Feb 2018, In: Frontiers in Plant Science. 9, 75.
Molecular mapping of YrTZ2, a stripe rust resistance gene in wild emmer accession TZ-2 and its comparative analyses with Aegilops tauschii, WANG, Z.-Z., XIE, J.-Z., GUO, L., ZHANG, D.-Y., LI, G.-Q., FANG, T.-L., CHEN, Y.-X., LI, J., WU, Q.-H., LU, P., LI, M.-M., WU, H.-B., ZHANG, H.-Z., ZHANG, Y., YANG, W.-Y., LUO, M.-C., Tzion, F. & LIU, Z.-Y., 2018, In: Journal of Integrative Agriculture. 17, 6, p. 1267-1275 9 p.
Retrotransposon-Based Genetic Diversity Assessment in Wild Emmer Wheat (Triticum turgidum ssp. dicoccoides), Vuorinen, A. L., Kalendar, R., Fahima, T., Korpelainen, H., Nevo, E. & Schulman, A. H., 2018, In: Agronomy. 8, 7, 107.
Wild emmer genome architecture and diversity elucidate wheat evolution and domestication, Avni, R., Nave, M., Barad, O., Baruch, K., Twardziok, S. O., Gundlach, H., Hale, I., Mascher, M., Spannagl, M., Wiebe, K., Jordan, K. W., Golan, G., Deek, J., Ben-Zvi, B., Ben-Zvi, G., Himmelbach, A., Maclachlan, R. P., Sharpe, A. G., Fritz, A. & Ben-David, R. & 28 others, Budak, H., Fahima, T., Korol, A., Faris, J. D., Hernandez, A., Mikel, M. A., Levy, A. A., Steffenson, B., Maccaferri, M., Tuberosa, R., Cattivelli, L., Faccioli, P., Ceriotti, A., Kashkush, K., Pourkheirandish, M., Komatsuda, T., Eilam, T., Sela, H., Sharon, A., Ohad, N., Chamovitz, D. A., Mayer, K. F. X., Stein, N., Ronen, G., Peleg, Z., Pozniak, C. J., Akhunov, E. D. & Distelfeld, A., 7 Jul 2017, In: Science. 357, 6346, p. 93-97 5 p.
The Development of the a World Database of Freshwater Algae-Indicators, Barinova, S. & Fahima, T., 2017, In: Journal of Environment and Ecology. 8, 1, p. 1-7
Evaluation of marker-assisted selection for the stripe rust resistance gene Yr15, introgressed from wild emmer wheat, Yaniv, E., Raats, D., Ronin, Y., Korol, A. B., Grama, A., Bariana, H., Dubcovsky, J., Schulman, A. H. & Fahima, T., Jan 2015, In: Molecular Breeding. 35, 1, p. 1-12 12 p.
Expression and Cellular Localization of ZIP1 Transporter Under Zinc Deficiency in Wild Emmer Wheat, Durmaz, E., Coruh, C., Dinler, G., Grusak, M. A., Peleg, Z., Saranga, Y., Fahima, T., Yazici, A., Ozturk, L., Cakmak, I. & Budak, H., Sep 2011, In: Plant Molecular Biology Reporter. 29, 3, p. 582-596 15 p.
Chromosomal regions controlling seedling drought resistance in Israeli wild barley, Hordeum spontaneum C. Koch, Chen, G., Krugman, T., Fahima, T., Chen, K., Hu, Y., Röder, M., Nevo, E. & Korol, A., Jan 2010, In: Genetic Resources and Crop Evolution. 57, 1, p. 85-99 15 p.
A kinase-START gene confers temperature-dependent resistance to wheat stripe rust, Fu, D., Uauy, C., Distelfeld, A., Blechl, A., Epstein, L., Chen, X., Sela, H., Fahima, T. & Dubcovsky, J., 2009, In: Science. 323, 5919, p. 1357-1360 4 p.
A NAC gene regulating senescence improves grain protein, zinc, and iron content in wheat, Uauy, C., Distelfeld, A., Fahima, T., Blechl, A. & Dubcovsky, J., 24 Nov 2006, In: Science. 314, 5803, p. 1298-1301 4 p.
גן שמקורו ב"אם החיטה" מישראל עשוי לשפר את האיכות התזונתית של גרגרי החיטה בעולם, ⁨דיסטלפלד, א.⁩ & ⁨פחימה, צ.⁩, 2006, In: גן שדה ומשק. 12, p. 5-7 3 p.
Genetic effects on microsatellite diversity in wild emmer wheat (Triticum dicoccoides) at the Yehudiyya microsite, Israel, Li, Y. C., Fahima, T., Röder, M. S., Kirzhner, V. M., Beiles, A., Korol, A. B. & Nevo, E., 1 Feb 2003, In: Heredity. 90, 2, p. 150-156 7 p.
High-density molecular map of chromosome region harboring stripe-rust resistance genes YrH52 and Yr15 derived from wild emmer wheat, Triticum dicoccoides, Peng, J. H., Fahima, T., Röder, M. S., Huang, Q. Y., Dahan, A., Li, Y. C., Grama, A. & Nevo, E., Sep 2000, In: Genetica. 109, 3, p. 199-210 12 p.
Parallel microgeographic patterns of genetic diversity and divergence revealed by allozyme, RAPD, and microsatellites in Triticum dicoccoides at Ammiad, Israel, Li, Y. C., Fahima, T., Krugman, T., Beiles, A., Röder, M. S., Korol, A. B. & Nevo, E., 2000, In: Conservation Genetics. 1, 3, p. 191-207 17 p.

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